Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865902:139865908:[+]	chr12:118502004:118502011:[-]	nonBSJ supported	3UTR	circRNA 5':UCC-GGAA 3' \|\| \|\|\| target 3':UGGACCUA 5'	-4.50	1	RIC-seq
chrX:139865942:139865951:[+]	chr12:118501998:118502007:[-]	nonBSJ supported	3UTR	circRNA 5':CUGAAGAUCC 3' \|\|\|\|\|\|:\| target 3':AACUUCUGGA 5'	-10.20	4	RIC-seq
chrX:139866052:139866065:[+]	chr12:118501999:118502012:[-]	nonBSJ supported	3UTR	circRNA 5':GGAUAAUUUGGGUC 3' \|\| \|::\|\|\|:\| target 3':ACUUCUGGACCUAA 5'	-9.50	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865902:139865908:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC