Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865968:139866018:[+]	chr19:2438172:2438224:[-]	nonBSJ supported	CDS	circRNA 5':CCAUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUCC--CAGUC---UUCCAGA 3' \|\|: \|\|\|\|\|\| \|\|\| \|\|\|\| \|\|:\|\|\| \|:\| \|\|\| \|\|\|: :\|\|\|\|\| target 3': GUG-AGAAGGCCUUC-AGGUCGAGGAGGACGUCCGAGACCGUCGCCAAGAGGUCC 5'	-41.10	1	RIC-seq
chrX:139865968:139866027:[+]	chr19:2438172:2438230:[-]	nonBSJ supported	CDS	circRNA 5':CCAUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUCC--CAGUC---UUCCAGAAAAUCCACG 3' \|\|: \|\|\|\|\|\| \|\|\| \|\|\|\| \|\|:\|\|\| \|:\| \|\|\| \|\|\|: :\|\|\|\|\| \|\|\|\|\| target 3': GUG-AGAAGGCCUUC-AGGUCGAGGAGGACGUCCGAGACCGUCGCCAAGAGGUCC---AGGUGU 5'	-46.60	1	RIC-seq