Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865559:139865579:[+] chr11:63357811:63357830:[-] nonBSJ supported 5UTR

circRNA 5': ACUGGUCUUCCACCAAAUCCA 3'


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target  3':GUGACC-GAC-GUGGUCGAGGA 5'

 -20.00 14 RIC-seq
chrX:139865631:139865671:[+] chr11:63357796:63357830:[-] nonBSJ supported 5UTR

circRNA 5':UUCAAGGUCUUCCAUCAAAUACAGAUCUU-CCAGCUAAUCCA 3'


            ||| ||: ||| |:|| ||||| |||


target  3': AGUCCCGCCU-GUAC--UGUGACCGACGUGGUCG---AGGA 5'

 -16.90 1 RIC-seq