5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866395:139866415:[+] | chr9:37588754:37588776:[-] | nonBSJ supported | 3UTR |
circRNA 5':AUCAAAUUAAUG-UCUU--CCAGC 3' |||||:| || |||| | ||| target 3':CGGUUUGA--ACAAGAAUUGUUCGU 5' |
-6.50 | 1 | RIC-seq |
| chrX:139866410:139866424:[+] | chr9:37588749:37588765:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCC--AGCCU-ACUUGUG 3' || |||| |||||| target 3': GGUCUCGGUUUGAACAA 5' |
-12.70 | 1 | RIC-seq |
| chrX:139866410:139866465:[+] | chr9:37588749:37588804:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCC--AGCCU-ACUUGUGUCUUCCAACAA--AGGUACGUCU-UCCAA-CAAAGGUACGUCUUC 3' || |||| |||||| |||| ||||| ||: |||| |||||: ||||: target 3': GGUCUCGGUUUGAACA-AGAA--UUGUUCGUCUUAAAAUACAGGUAAGUUUCU---CAGAGA 5' |
-29.20 | 12 | RIC-seq |