Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866585:139866628:[+]	chr11:46792410:46792443:[-]	nonBSJ supported	CDS	circRNA 5':CGUCUUCCAACAAAUCCAUGUCUUCCUAUAUCUCCA----GGUCUUCC 3' \|:\|\|\|\| \|\|\| :\|:\|\|\|\|\|\|\| \|:\|\|\|\|\| target 3':CCGGAAGA--------------AAGCGUGUAGAGGUAAAGCUAGAAGA 5'	-26.20	4	RIC-seq
chrX:139866613:139866646:[+]	chr11:46792404:46792443:[-]	nonBSJ supported	CDS	circRNA 5':UAUCUCCAGGUCUUCCA----GCAUCUCCAGGG----CUUCC 3' \|\|\|\| \|\|:\|\|\|\| :\|\|\|\|\|\|\|\| \|\|\|\| target 3': UAGAAC-CCGGAAGAAAGCGUGUAGAGGUAAAGCUAGAAGA 5'	-26.80	14	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866585:139866628:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC