Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866277:139866309:[+] chr14:36142114:36142162:[-] nonBSJ supported CDS

circRNA 5':CAUGUCUUCCAGAAAAUC-----------------CUUGUCUUCCC-UCAA 3'


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target  3':UUACACAA--UCUUUUAGAGAUAAACCUCUUUGUAGAACAGAAGAAAAGUA 5'

 -18.40 22 RIC-seq
chrX:139866286:139866309:[+] chr14:36142138:36142162:[-] nonBSJ supported CDS

circRNA 5':CAGAAAAUCCUUGUCUUCCC-UCAA 3'


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target  3':CUCUUUGUAGAACAGAAGAAAAGUA 5'

 -17.00 19 RIC-seq
chrX:139866294:139866309:[+] chr14:36142146:36142162:[-] nonBSJ supported CDS

circRNA 5':CCUUGUCUUCCC-UCAA 3'


            ||||||||| |||


target  3':AGAACAGAAGAAAAGUA 5'

 -14.00 1 RIC-seq