Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865570:139865598:[+] chr12:112598289:112598314:[-] nonBSJ supported 3UTR

circRNA 5':ACCAAAUCCA-GAUCUUCCAGGAAAAUCCA 3'


            |||| ||||| | ||| ||


target  3':CGGUUCCAAACCUAGACAGACCU----GGA 5'

 -11.10 2 RIC-seq
chrX:139866440:139866450:[+] chr12:112605204:112605214:[-] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAA 3'


            |||||||||


target  3':CGCAGAAGGUC 5'

 -15.30 1 RIC-seq
chrX:139866458:139866468:[+] chr12:112605204:112605214:[-] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAA 3'


            |||||||||


target  3':CGCAGAAGGUC 5'

 -15.30 1 RIC-seq