5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866624:139866699:[+] | chr5:43176152:43176204:[+] | nonBSJ supported | 3UTR |
circRNA 5':CUUCCAG-CAUCUCCAGGGCUUCCAGCAUC--UGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCUCUGUGUCUUC 3' ||||| || ||::||:| |:| ||||| |||||||: ||| target 3':UAAGGUAAGUUUU-GUUUCGGACUAUUAAUAUAUGUACAGAA------------------------AGAGACAU-GAAA 5' |
-27.70 | 1 | RIC-seq |
| chrX:139866655:139866700:[+] | chr5:43161357:43161403:[+] | nonBSJ supported | CDS |
circRNA 5': CUCGUC--UUCCAACAUCUCCACGUCUUCCAGCAUCUCUGUGUCUUCC 3' |||:| |||| ||:|| ||| || ||| target 3':GGAGUAAAAAAGGACACCAUAAA--AGGAGAUUCCCUCGACUCAAAAGA 5' |
-16.30 | 2 | RIC-seq |
| chrX:139865925:139865955:[+] | chr5:43137260:43137282:[+] | nonBSJ supported | Intron |
circRNA 5':AGCCAAUAUAUGUCUUCCUGAAGAUCCACGU 3' || |:||| | ||||||| target 3':ACGAAAAC-UGCAG-------UGUAGGUGCU 5' |
-14.10 | 2 | RIC-seq |