Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865758:139865806:[+] chr2:95715365:95715403:[+] nonBSJ supported CDS

circRNA 5':AAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUC 3'


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target  3':GUAG-CACUACCACC---------GGUCCCGGAGGUCCUGACUCCGCGA 5'

 -23.70 23 RIC-seq
chrX:139865758:139865806:[+] chr2:95715366:95715403:[+] nonBSJ supported CDS

circRNA 5':AAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUC 3'


            ||| ||| ||||| |:||||| |:|:


target  3':GUAG-CACUACCACC---------GGUCCCGGAGGUCCUGACUCCGCG 5'

 -23.10 1 RIC-seq