Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865524:139865568:[+]	chr17:65944351:65944408:[+]	nonBSJ supported	CDS	circRNA 5':UCAAGUCU---UCCAGCAAA--UCCAGUCUUC-------CAGCAAUUA-CUGGUCUUC 3' \|\| :\|\|: \|\|\|\|\| \|\| \|\|\|\|\| \| \|\| \|\|\| \|\|\|\| target 3':CGUCUAGGAACAGGUCCUCACGAGAGAAGAAGUCCUAGAGCCGAGACUCGACGAGAAA 5'	-19.40	2	RIC-seq
chrX:139865742:139865771:[+]	chr17:65907336:65907369:[+]	nonBSJ supported	CDS	circRNA 5': UCUAGA-UCUUCCAGUCAAUCAGUG--UCUUCC 3' \|\|\| \| \|\| \|\| \|\|\|\|\| \|\| \| :\|\|\|\| target 3':AAGAACAGAGUAGCUCAGUGAGACUGUGGGAAGA 5'	-14.40	2	RIC-seq
chrX:139865983:139866018:[+]	chr17:65907216:65907271:[+]	nonBSJ supported	CDS	circRNA 5':AAUCCAUGUCUUCCAGUAACCUCCCAG------------------------UCUUCCAGA 3' \|:\|\| \|: \|\|\|\|\| \|\|\|\|\| \|\|\|\|\|\|\|\| target 3':AUGGGAAUU-AAGGUG---GGAGGUUGAACUAAAAAAGCUCAGCGACAAAAAGAAGGUCA 5'	-24.50	2	RIC-seq