Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865803:139865850:[+] chr8:61754467:61754496:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCA 3'


            |||| |||| :|||| ||||: ::||||||


target  3':UCAGAC--UCUU-------------GAGGU-AGUCGA--GUAGAAGGA 5'

 -24.10 3 RIC-seq
chrX:139866632:139866670:[+] chr8:61754462:61754495:[+] nonBSJ supported CDS

circRNA 5':AUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUCCAACAUC 3'


            ||| ||::||: |||| ||||:|||||| ||:


target  3':CAGAC-UCUUGAG----GUAGUCGAGUAGAAGGAAGUGA 5'

 -32.10 3 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr8:61754462:61754495:[+] target 3144194 chr8:61754462-61754463 AG>A Inborn_genetic_diseases ClinVar