Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866277:139866314:[+] chr7:149577577:149577612:[+] nonBSJ supported 3UTR

circRNA 5':CAUGUCUUCCAGAAA-AUCCUUGUCUUCCCUCAAAUCCA 3'


            |||| ||| ||||| |||:| |||


target  3': UACACUCACUCUCCGUAGGAUAAGAGGACGACG-AGG 5'

 -17.90 1 RIC-seq
chrX:139866277:139866315:[+] chr7:149577576:149577612:[+] nonBSJ supported 3UTR

circRNA 5':CAUGUCUUCCAGAAA-AUCCUUGUCUUCCCUCAAAUCCAU 3'


            |||| ||| ||||| |||:| ||||


target  3': UACACUCACUCUCCGUAGGAUAAGAGGACGACG-AGGU 5'

 -18.40 6 RIC-seq