Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866628:139866633:[+] chr8:125499560:125499565:[+] nonBSJ supported CDS

circRNA 5':CAGCAU 3'


            ||||


target  3':CUCGUC 5'

 -3.90 1 RIC-seq
chrX:139866682:139866695:[+] chr8:125499551:125499565:[+] nonBSJ supported CDS

circRNA 5':CAGCAUCUC-UGUGU 3'


            |||| |||:


target  3':CUCGUCUACAACAUU 5'

 -4.60 1 RIC-seq
chrX:139866691:139866705:[+] chr8:125499560:125499574:[+] nonBSJ supported CDS

circRNA 5':UGUGUCUU-CCAGCAU 3'


            |||| | | ||||


target  3': CACAUUAUGCUCGUC 5'

 -6.30 1 RIC-seq