Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866210:139866240:[+] chr5:132412409:132412433:[+] nonBSJ supported CDS

circRNA 5': CUUCCAGGAAAUCCGUGUCUUC-CAGCAAGUC 3'


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target  3':AGAAGGG--UUUA-----AGAAGUGUC-UUCAC 5'

 -16.00 10 RIC-seq
chrX:139866220:139866240:[+] chr5:132412409:132412431:[+] nonBSJ supported CDS

circRNA 5':AUCCGUG--UCUUC-CAGCAAGUC 3'


            ||| ||||| ||| ||||


target  3':AAGGGUUUAAGAAGUGUC-UUCAC 5'

 -14.90 1 RIC-seq
chrX:139866262:139866291:[+] chr5:132412411:132412434:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCAGACUAUCCAUGUCUUC-CAGAAA 3'


            |||||| ||||| |||||


target  3':AAGAAGGGUUUA-------AGAAGUGUCUUC 5'

 -17.40 10 RIC-seq