Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866113:139866143:[+] chr10:131334504:131334533:[+] nonBSJ supported CDS

circRNA 5':CCAC-AUCU---UCCAAUGGCCUCCAGGUCUUCCA 3'


            ||| |||: |||| ||||:|| ||


target  3':AGUGUUAGGAACAGGUAAAA--AGGUUCAU--GG 5'

 -18.80 28 RIC-seq
chrX:139866150:139866179:[+] chr10:131334510:131334538:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCCAGAAAAUCCUUGUCU-----UCCC 3'


            ||| || ||||||||||: |||


target  3':AGUAAAGUG------UUAGGAACAGGUAAAAAGGU 5'

 -17.50 1 RIC-seq
chrX:139866164:139866179:[+] chr10:131334510:131334530:[+] nonBSJ supported CDS

circRNA 5':AAAUCCUUGUCU-----UCCC 3'


            ||||||||||: |||


target  3':GUUAGGAACAGGUAAAAAGGU 5'

 -17.50 30 RIC-seq