Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865877:139865896:[+] chr17:7815727:7815744:[+] nonBSJ supported 3UTR

circRNA 5':CAGGUCUUCCAGUCAAUCCA 3'


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target  3':CUUCAGAAGGUCCUU--GGA 5'

 -18.10 2 RIC-seq
chrX:139865760:139865774:[+] chr17:7801408:7801421:[+] nonBSJ supported CDS

circRNA 5':UCAGUGUCUUCCAGA 3'


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target  3':GGCCACAG-AGGUCA 5'

 -15.10 2 RIC-seq
chrX:139865799:139865813:[+] chr17:7801408:7801421:[+] nonBSJ supported CDS

circRNA 5':UCAGUGUCUUCCAGA 3'


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target  3':GGCCACAG-AGGUCA 5'

 -15.10 1 RIC-seq
chrX:139866405:139866440:[+] chr17:7801335:7801368:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUA 3'


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target  3':GUAGAAGGA-GGGUGCAC-CUGACCAGUAUA-CCAUU 5'

 -20.40 1 RIC-seq