Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866636:139866642:[+] chr17:7322353:7322359:[+] nonBSJ supported 3UTR

circRNA 5':CCAGGGC 3'


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target  3':CGUCCCA 5'

 -8.50 15 RIC-seq
chrX:139866700:139866732:[+] chr17:7322401:7322444:[+] nonBSJ supported 3UTR

circRNA 5': CAGCAUCUUCAU------GUCUUCCAACAACUACC---CAGU 3'


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target  3':AGUCGACUCCUCUUCCGACCAGACUGUGACUCUACCCCUGUCGA 5'

 -6.60 17 RIC-seq
chrX:139866701:139866711:[+] chr17:7322397:7322407:[+] nonBSJ supported 3UTR

circRNA 5':AGCAUCUUCAU 3'


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target  3':CUGUCGAAGUU 5'

 -7.30 2 RIC-seq