Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866055:139866101:[+] chr15:31666444:31666485:[+] nonBSJ supported 3UTR

circRNA 5':UAAUUU-GGGUCUUCCUGAAAAUCUAC--GUCUUCCAAAAAAGCCAUGUC 3'


            ||||| |||||: |:||| ||| || :|||:|:


target  3': UUAAAUCCCAGGUAGCCAGAUGGAUCUUCAGU-GG------UGGUGCGA 5'

 -25.40 25 RIC-seq
chrX:139866060:139866101:[+] chr15:31666444:31666480:[+] nonBSJ supported 3UTR

circRNA 5':UGGGUCUUCCUGAAAAUCUAC--GUCUUCCAAAAAAGCCAUGUC 3'


            |||||: |:||| ||| || :|||:|:


target  3':UCCCAGGUAGCCAGAUGGAUCUUCAGU-GG------UGGUGCGA 5'

 -24.80 2 RIC-seq