Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866341:139866351:[+] chr17:80020792:80020803:[-] nonBSJ supported CDS

circRNA 5':AGGAAAUC-CGU 3'


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target  3':CCCUUCUGUGCC 5'

 -5.40 12 RIC-seq
chrX:139866341:139866362:[+] chr17:80020793:80020810:[-] nonBSJ supported CDS

circRNA 5':AGGAAAUC-CGUGUCUUCCAGCA 3'


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target  3': CCUUCUGUGC-CUAAAA--CG 5'

 -5.10 1 RIC-seq
chrX:139866638:139866652:[+] chr17:80020791:80020802:[-] nonBSJ supported CDS

circRNA 5':AGGGCUUCCAGCAUC 3'


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target  3':GCCCUUC---UGUGC 5'

 -5.10 1 RIC-seq