5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865559:139865599:[+] | chrX:28605634:28605675:[+] | nonBSJ supported | 5UTR |
circRNA 5':ACUGGUCUUCCACC-AAA---UCCAGAUCUUCCAGGAAAAU-CCAC 3' |||||| :||| ||| ||||||||: ||| ||| target 3':GGACCAG-GGGUUCAUUUUAAAGGUCUAGGC---CCUACGUCGGUA 5' |
-29.30 | 34 | RIC-seq |
| chrX:139865581:139865626:[+] | chrX:28605634:28605681:[+] | nonBSJ supported | 5UTR |
circRNA 5': AUCUUCCAGGAAAAUCCACGUC----UUCCAGGAAAUCC---AUGUCUUCCAA 3' |||:||| || :||| || |||||| |||| ||| | ||| target 3':UUAGGAGGACCAG--GGGUUCAUUUUAAAGGUC---UAGGCCCUAC-GUCGGUA 5' |
-27.40 | 1 | RIC-seq |
| chrX:139866461:139866517:[+] | chrX:29301193:29301254:[+] | nonBSJ supported | CDS |
circRNA 5':UCUUCCAACAAAGGUA--UG--UCUUCCAACAAAGGUACGUCUU--CCAGAAAAU-----CCACGUCU 3' ||||| ||||||: || ||||| ||:|| | :| |||||| ||||:|| target 3':UGAAGGCAGUUUCCGAUAACCGAGAAG-----UUUCA-GAGGUCCUGGUCUUGAAAACAUGGUGUAGU 5' |
-38.90 | 27 | RIC-seq |
| chrX:139866479:139866517:[+] | chrX:29301193:29301254:[+] | nonBSJ supported | CDS |
circRNA 5':UCUUCCAACAAAGGUAC-------------GUCUU-----CCAGAAAAU-----CCACGUCU 3' ||||| ||||||: ||||: |||||| ||||:|| target 3':UGAAGGCAGUUUCCGAUAACCGAGAAGUUUCAGAGGUCCUGGUCUUGAAAACAUGGUGUAGU 5' |
-33.10 | 1 | RIC-seq |