Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866614:139866638:[+] chr3:160939530:160939552:[+] nonBSJ supported 5UTR

circRNA 5':AUCUCCAGGUCUUCCAGCAUCU-CCA 3'


            |||| ||:| :||||| ||| ||


target  3':GGGAGC-CCGGUGGGUCG-AGACGG 5'

 -24.70 1 RIC-seq
chrX:139866629:139866657:[+] chr3:160939530:160939554:[+] nonBSJ supported 5UTR

circRNA 5':AGCAUCUCCAGGGCU-UCCAGCAUCUGCUC 3'


            || :||| ||||: :||||| |||||:


target  3':CUG-GGAG--CCCGGUGGGUCG-AGACGG 5'

 -31.30 23 RIC-seq