Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865502:139865527:[+] chr8:67405729:67405752:[+] nonBSJ supported 5UTR

circRNA 5':AAGCUCCAAGUC-UUCCAGUAAAUCAA 3'


            ||||| || ||||||| |||


target  3': UCGAGUAG-AGCAAGGUCAGA-AGUG 5'

 -18.30 5 RIC-seq
chrX:139865503:139865527:[+] chr8:67405729:67405751:[+] nonBSJ supported 5UTR

circRNA 5':AGCUCCAAGUC-UUCCAGUAAAUCAA 3'


            |||| || ||||||| |||


target  3': CGAGUAG-AGCAAGGUCAGA-AGUG 5'

 -16.60 1 RIC-seq