5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865716:139865766:[+] | chr9:94577467:94577513:[-] | nonBSJ supported | Intron |
circRNA 5':CAGUAAAUCUAGUUCUUCCAGAAAA-AUCUAGAUCUUCCAGUCAAUCAGUGU 3' || |||||:||| |:|||| |:|| ||||| ||| |:|| target 3':UUCCUUUAGGUCAUUGUAAUUUUUUAUGGAAA---AAGGUA--UUAUUUACU 5' |
-17.40 | 1 | RIC-seq |
| chrX:139866675:139866717:[+] | chr9:94465919:94465971:[-] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCA-GCAUCUCUG-------------------UGUCUUCCAGCAUCUUCAUGUCUUC 3' ||||| |||||| |||| |||||| |||: target 3':ACAGAAAAGACGUAGAUAACUCUACUAGUAUACCAAAAACAG---------GAAGUA-AGAGA 5' |
-19.20 | 1 | RIC-seq |
| chrX:139866675:139866720:[+] | chr9:94465919:94465966:[-] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCAGCAUCUCUGUGUCUUCC-AGCAUCUUCA---------UGUCUUCCAA 3' ||||| ||||::||| || || ||| ||||:| || target 3':ACAGAAA-------AGACGUAGAUAACUC-UACUAGUAUACCAAAAACAGGAAGUA 5' |
-18.80 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr9:94465919:94465966:[-] | target | - | chr9:94465951-94465952 | G>T | PACA-CA | ICGC |
| chr9:94465919:94465971:[-] | target | - | chr9:94465951-94465952 | G>T | PACA-CA | ICGC |