Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865635:139865696:[+]	chrX:153289366:153289418:[-]	nonBSJ supported	3UTR	circRNA 5':AGGUCUUCCAUCAAAUACAGAUCUUCCAGCUAAUCCAU-GUCUU-CCA--GAAAAA-UCUGUGUCUU 3' \|\|\|\|:\|\|\| \|\|\| \|:\|: \|\|\| \|\|\|\| :\|\|:\|\| \|\| target 3':ACCAGGAGGCUUCC--------------CGAGUGCCCAUCGGGCCGGUGACUUUCCCGGAUACCGAC 5'	-25.10	2	RIC-seq
chrX:139865814:139865841:[+]	chrX:153294712:153294742:[-]	nonBSJ supported	3UTR	circRNA 5':AAGAAAUCCAGGUC-UUC-CAGUCA--GUCAG 3' \| \|\|\|\|\|\|\|\|\|\| \|\|\| \|\|: \|\| \|\|\|\| target 3':AUGUUUAGGUCCAUCAAGAGUU-GUGACAGUG 5'	-21.70	2	RIC-seq
chrX:139866689:139866724:[+]	chrX:153291307:153291343:[-]	nonBSJ supported	3UTR	circRNA 5': UCUGUGUCUUCCAGCAUCUUCAUGUCUUCCAACAAC 3' \|\|\|\| \|\|\| \|\|\|:\| \|:\| \|\| \|\|\|\|\| target 3':GGGACCCCCUCCGUCAUAGGAUUGCUAAAUAUUGUUC 5'	-12.80	1	RIC-seq
chrX:139866699:139866724:[+]	chrX:153291318:153291343:[-]	nonBSJ supported	3UTR	circRNA 5':CCAGCAUCUUCAUGUCUUCCAACAAC 3' \|\|\| \|\|\|:\| \|:\| \|\| \|\|\|\|\| target 3':CGUCAUAGGAUUGCUAAAUAUUGUUC 5'	-10.40	1	RIC-seq