Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866292:139866341:[+]	chr4:106068046:106068087:[+]	nonBSJ supported	5UTR	circRNA 5':AUCCUUGUCUUCCCUCAAAUCCAUA---GCUUCCGAAAAAUCCAGGUCUUCCA 3' \|\|\|\|\| \|\|\| \|\|\|\|\|\|\| \|\| \|\| \|\|\| \| \|\|\|\|\| target 3':GAGGAA-AGAUU---GUUUAGGAUUUCCCGUCGG-----UAGAA-C-GAAGGA 5'	-22.70	2	RIC-seq
chrX:139866503:139866552:[+]	chr4:106157508:106157550:[+]	nonBSJ supported	CDS	circRNA 5':AGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCCAGAAAAUCCACGUC 3' \|\|\| \|\| \|\|\| \|: \|\|:\|\|\|\|\| \|\|\| \|:\| target 3':CCUUAAAGAUGCUAAAUAUAAGACA--UGAAGGAGGUC----AGG-GUAA 5'	-16.90	4	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866292:139866341:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC