5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866352:139866395:[+] | chr2:149857252:149857290:[+] | nonBSJ supported | CDS |
circRNA 5':GUCUUCCAGCAAAUCCACGUCUUCCAACAAAGCCAUGUCUUCCA 3' ||:|||||| |||||| || ||| |:|| target 3':GAGGAGGUCGGGAAACUCCAGAAGAGAC---CGA-ACA-AGGGA 5' |
-27.40 | 2 | RIC-seq |
| chrX:139865453:139865520:[+] | chr2:149828952:149829019:[+] | nonBSJ supported | Intron |
circRNA 5':CACAUCUUCCAGACAAUCCAUGUCUUCC--GGACAAUCCAUGUCUUCCAAGAA--------GCUCCA---AGUCUUCCAGU 3' ||||| ||||| ||: ||| ||| ||||| ||:||| |||||:|||: target 3':UUGUAGUU--UCUGUAUUUCACGUAUUUUUCCU-----------AAGAUUCUUUUGAUGACCGGGGUGACUCAGAGGGUUU 5' |
-34.20 | 2 | RIC-seq |
| chrX:139866328:139866377:[+] | chr2:149689642:149689707:[+] | nonBSJ supported | Intron |
circRNA 5':AUCCAGGUCUUCCAGGAA------------------AUCCGUGUCUUCCAGCAAA----UCCACGUCUUCCA 3' |||||| ||| ||| ||| :|| ||| |||| ||| :||||| target 3':AAGGUCCU--AGGACCUAAAGAACCAGAGAGCGUCAUAGAUACUGAA-GUCGAAUCCCGAGGA--GGAAGG 5' |
-34.80 | 2 | RIC-seq |