Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865358:139865390:[+] chr1:228682059:228682089:[+] nonBSJ supported 3UTR

circRNA 5':UGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA 3'


            ||| :||||||| |||| | ||


target  3': UAGG-UCAGAAGGAAAGAGAGGGACUUCUGGA 5'

 -21.90 18 RIC-seq
chrX:139865982:139866008:[+] chr1:228682067:228682091:[+] nonBSJ supported 3UTR

circRNA 5':AAAUCCAUGUCUUCCAGUAACCUCCCA 3'


            |||||| ||||||| |||||


target  3':GUUAGGU-CAGAAGGAAAGA-GAGGGA 5'

 -27.30 6 RIC-seq