Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866061:139866132:[+] chr17:73038633:73038673:[-] nonBSJ supported CDS

circRNA 5': GGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACAU-CUUCCAAUGGCCUC 3'


            |||||| ||| ||||| || || |||||||||


target  3':UCCCAGA-----------------------------GUA----AGGUCCUAAAGUCCCUUGAUCGUUACCGGAA 5'

 -28.80 7 RIC-seq
chrX:139866098:139866132:[+] chr17:73038635:73038673:[-] nonBSJ supported CDS

circRNA 5':UGUCU---UCCAGAAAAUCCACAU-CUUCCAAUGGCCUC 3'


            |||| ||||| || || |||||||||


target  3':CCAGAGUAAGGUCCUAAAGUCCCUUGAUCGUUACCGGAA 5'

 -25.50 1 RIC-seq