Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866680:[+] chr16:31091197:31091251:[+] nonBSJ supported CDS

circRNA 5':AGGUC-UUCC-AGCAUCUCCAGGGCUUCCAGCAUCU-GCUCGUCUUC-CAACA-UCUCCACGUCUU 3'


            ||:| :|| ||| ||||| ||| ||| || :|||| | || |||||| |:||


target  3':CCCGGCGAGUCUCGA-------CCGAA-GUC--AGACCGUCGGGAAGAGCCGUCAGAGGU-CGGAC 5'

 -38.00 8 RIC-seq
chrX:139866628:139866704:[+] chr16:31091199:31091258:[+] nonBSJ supported CDS

circRNA 5':CAGCAUCUCCAGGGCUUC-CAGCAUCUGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCA--UCUCUGU-GUCUUCCAGCA 3'


            ||| |||||: | ||| ||| | |||| |||| |||| |||| |: ||| ||||||


target  3': UCGACU---UCCCGGCGAGUCU----CGACC-GAAGU-----------CAGACCGUCGGGAAGAGCCGUCAG-AGGUCGG 5'

 -45.60 10 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr16:31091197:31091251:[+] target rs3751855 chr16:31091209-31091210 T>C Neurociticism|Neuroticism GWAS Catalog
chr16:31091199:31091258:[+] target rs3751855 chr16:31091209-31091210 T>C Neurociticism|Neuroticism GWAS Catalog