5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865382:139865400:[+] | chr19:44096917:44096934:[-] | nonBSJ supported | CDS |
circRNA 5':GGUCUUCCAGCGACUUCAA 3' |: ||||||| || || target 3':ACGCUAGGUCGC-GAUGUA 5' |
-16.70 | 2 | RIC-seq |
| chrX:139865432:139865498:[+] | chr19:44090116:44090194:[-] | nonBSJ supported | Exon |
circRNA 5':AUCCU--GAGCUUC-CAGAAAAUCCACAUCUUCCAGACAA-UCC---AUGUCUUCC---------GGACAAUCCAUGUCUUCC 3' ||| |||| :| ||| |||||:|:| || ||| ||| |:|| ||||| :|:||| target 3':GAGGUUUCUCGUGGUGUCCGGUUGGUGUGGGAA--CUACACAGGAAGUACCAAGGGGUGACGUCACCUGUGUUUA--GGGAGG 5' |
-41.30 | 1 | RIC-seq |
| chrX:139865439:139865494:[+] | chr19:44090114:44090176:[-] | nonBSJ supported | Exon |
circRNA 5':GCUUCCAGAAAAU-CCACA--UCUUCCAGACAAUCCAUGU---CUUCC-GGACAAUCCA-UGUC 3' |:||||:| ||||| :| ||| || | |||| |||| || :||| ||: target 3':AGGAGGUUUCUCGUGGUGUCCGGUUGGUGUGGGAACUACACAGGAAGUACCAAG-GGGUGACGU 5' |
-35.20 | 1 | RIC-seq |
| chrX:139865936:139865972:[+] | chr19:44092925:44092954:[-] | nonBSJ supported | Exon |
circRNA 5': GU-CU-UCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUG 3' || || :|||| || |:|:||| ||||| target 3':UCACGACGGGAC------GU-CGGGAGGGUA---AGGUAG 5' |
-20.40 | 2 | RIC-seq |
| chrX:139865415:139865443:[+] | chr19:44094420:44094444:[-] | nonBSJ supported | Intron |
circRNA 5':UCAAGGUCUUCCAGAUAAUCCUGAGCUUC 3' ||||| |||||: | ||:| target 3':CGUUCCC---GGUCUGGGUGU-CCCGGAA 5' |
-15.80 | 2 | RIC-seq |