Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866186:139866236:[+]	chr9:131024865:131024910:[-]	nonBSJ supported	CDS	circRNA 5': CUAUAGCUUCCAAAAAAUCCGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCA 3' \|\| \|\|:\|\|\|\| \|:: \|\|\|\|\|\|\|:\| \|\|: \|\|\|\|\| target 3':AGAGAUUGAAGAAAAC----GUUAAGAAGGUUCAAUUCG-ACGUACGGUCG 5'	-29.00	2	RIC-seq
chrX:139866220:139866265:[+]	chr9:131024857:131024908:[-]	nonBSJ supported	CDS	circRNA 5':AUCCGU-GUCUUCCAGCAAGUCCACG--UCUUCCAACA-AAGC--CAUGUCU 3' \|\|\|\|\| :\|\|\|: \|\|\|\|\|\|\|\| \|\|\|\| \|\|\|\|:\| target 3':AAGGCAGUAGAGAUUGAAGAAAACGUUAAGAAGGUUCAAUUCGACGUACGGU 5'	-29.60	7	RIC-seq