Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865614:139865646:[+] chr22:25315891:25315931:[+] nonBSJ supported CDS

circRNA 5': CCAUGUC---UUCCAAUAAUU--UCAAGGU---CUUCCAUC 3'


            |||||| :||||| ||| ||| ||||||:


target  3':AGGUACAACAAGAGGUUUUACUACAGUGCCAUCUGAAGGUG 5'

 -24.10 17 RIC-seq
chrX:139865615:139865646:[+] chr22:25315891:25315930:[+] nonBSJ supported CDS

circRNA 5': CAUGUC---UUCCAAUAAUU--UCAAGGU---CUUCCAUC 3'


            ||||| :||||| ||| ||| ||||||:


target  3':GGUACAACAAGAGGUUUUACUACAGUGCCAUCUGAAGGUG 5'

 -21.00 2 RIC-seq