Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865550:139865573:[+] chr21:33840023:33840045:[+] nonBSJ supported CDS

circRNA 5':CCAGCAAUUACUGGUCUUC-CAC-CA 3'


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target  3':AGUCGAG---GACCAGAAGUGUGUGC 5'

 -24.40 29 RIC-seq
chrX:139865550:139865573:[+] chr21:33840024:33840045:[+] nonBSJ supported CDS

circRNA 5':CCAGCAAUUACUGGUCUUC-CAC-CA 3'


            |||| ||||||||| ||| |


target  3':AGUCGAG---GACCAGAAGUGUGUG 5'

 -24.60 1 RIC-seq