Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866341:139866356:[+] chr15:67358489:67358502:[+] nonBSJ supported CDS

circRNA 5':AGGAAAUCCGUGUCUU 3'


            ||| |:|| ||


target  3':ACCUGCU-GUACCGA 5'

 -6.60 2 RIC-seq
chrX:139866384:139866392:[+] chr15:67358489:67358496:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUU 3'


            |||| ||


target  3':UGUACCGA 5'

 -3.40 1 RIC-seq
chrX:139866436:139866458:[+] chr15:67358489:67358502:[+] nonBSJ supported CDS

circRNA 5':AGGUACGUCUUCCAACAAAGGUA 3'


            || ||| ||| ||:


target  3':ACC-UGC-------UGUA-CCGA 5'

 -6.40 2 RIC-seq
chrX:139866454:139866476:[+] chr15:67358489:67358502:[+] nonBSJ supported CDS

circRNA 5':AGGUACGUCUUCCAACAAAGGUA 3'


            || ||| ||| ||:


target  3':ACC-UGC-------UGUA-CCGA 5'

 -6.40 3 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr15:67358489:67358496:[+] target 520186 chr15:67358493-67358494 A>C Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar
chr15:67358489:67358496:[+] target 1172631 chr15:67358493-67358494 A>G Aortic_aneurysm ClinVar
chr15:67358489:67358496:[+] target 930360 chr15:67358493-67358494 A>T Aneurysm-osteoarthritis_syndrome|Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar
chr15:67358489:67358496:[+] target 3075380 chr15:67358494-67358495 T>C Aneurysm-osteoarthritis_syndrome ClinVar
chr15:67358489:67358496:[+] target 1174530 chr15:67358495-67358496 G>A Aneurysm-osteoarthritis_syndrome|Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar
chr15:67358489:67358502:[+] target 520186 chr15:67358493-67358494 A>C Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar
chr15:67358489:67358502:[+] target 1172631 chr15:67358493-67358494 A>G Aortic_aneurysm ClinVar
chr15:67358489:67358502:[+] target 930360 chr15:67358493-67358494 A>T Aneurysm-osteoarthritis_syndrome|Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar
chr15:67358489:67358502:[+] target 3075380 chr15:67358494-67358495 T>C Aneurysm-osteoarthritis_syndrome ClinVar
chr15:67358489:67358502:[+] target 1174530 chr15:67358495-67358496 G>A Aneurysm-osteoarthritis_syndrome|Familial_thoracic_aortic_aneurysm_and_aortic_dissection ClinVar