5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865336:139865372:[+] | chr16:15698039:15698077:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGGGUUUCCGAUGGCACCUGUGUCAAGGUCU----UCCA 3' |||| |:| | :||| | ||||||||| |||| target 3':CGUCCGAGAAG---UCGUCAAGCCAGUUCCAGUACUUAGGUA 5' |
-27.30 | 1 | RIC-seq |
| chrX:139865494:139865563:[+] | chr16:15727633:15727686:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAAUCCAGUCU-UCCAGCAAUUACUGG 3' |:||||:||:|||||| ||| ||| ||| |||| :|| |||||| ||||| target 3':UAGGGUUUUUUGAGGUUACCCCC--CAU-----UCAAAAGAUCGU-------GGACAGGUCG---AUGACG 5' |
-42.60 | 17 | RIC-seq |
| chrX:139865494:139865563:[+] | chr16:15727633:15727696:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAA--UCCAGUCUUCCAGCAAUUACUGG 3' |:||||:||:|||||| ||| ||| ||| |||| ||||| || ||||:| |||| target 3':UAGGGUUUUUUGAGGUUACCCCC--CAU-----UCAAAAGAUCGUGGACAGGUC-GAUGA-CGUUGAAGACCA 5' |
-49.00 | 1 | RIC-seq |
| chrX:139865494:139865564:[+] | chr16:15727633:15727697:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAA--UCCAGUCUUCCAGCAAUUACUGGU 3' |:||||:||:|||||| ||| ||| ||| |||| ||||| || ||||:| ||||| target 3':UAGGGUUUUUUGAGGUUACCCCC--CAU-----UCAAAAGAUCGUGGACAGGUC-GAUGA-CGUUGAAGACCAC 5' |
-50.50 | 1 | RIC-seq |
| chrX:139865494:139865565:[+] | chr16:15727633:15727697:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAA--UCCAGUCUUCCAGCAAUUACUGGUC 3' |:||||:||:|||||| ||| ||| ||| |||| ||||| || ||||:| ||||| target 3':UAGGGUUUUUUGAGGUUACCCCC--CAU-----UCAAAAGAUCGUGGACAGGUC-GAUGA-CGUUGAAGACCAC 5' |
-50.80 | 16 | RIC-seq |
| chrX:139866332:139866359:[+] | chr16:15729523:15729547:[-] | nonBSJ supported | CDS |
circRNA 5':AGGUCUUC-CAGGAAAUCCGUGUCUUCCA 3' ||||||| ||| || ||| :|| target 3':GUCAGAAGCGUCAUUU---CACUC-GGGA 5' |
-16.80 | 26 | RIC-seq |