Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865435:139865484:[+] chr17:71192710:71192748:[+] nonBSJ supported CDS

circRNA 5': CUGA---GCUUCCAGAAAA-UCCACAUCUUCCAGACAAUCCAUGUCUUCCGGAC 3'


            |||| ||||||| |||| |||||| ||||||


target  3':UGACUCUCCGAAGGUAGCUCGAGGUCUAGAAG----------------AGGCCUU 5'

 -33.90 14 RIC-seq
chrX:139865436:139865484:[+] chr17:71192710:71192744:[+] nonBSJ supported CDS

circRNA 5':UGA-GCUUCCAGAAAA-UCCACAUCUUCCAGACAAUCCAUGUCUUCCGGAC 3'


            || ||||||| |||| |||||| ||||||


target  3':UCUCCGAAGGUAGCUCGAGGUCUAGAAG----------------AGGCCUU 5'

 -32.30 2 RIC-seq