Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865791:139865849:[+]	chr11:6631172:6631239:[+]	nonBSJ supported	CDS	circRNA 5':CCAGUCAAUCAGUGUCUUCCAGAAAGA-AAUCC-AGGUCUUCCA-GU---------CAGUCAGUGUCUUCC 3' \|\| \| \|:\|\|\| \| \| \|\|\|\|\|\| \|\|: \| :\|\| \|\|\| \|: \|\|\|\|\|\| \|\|\|\|:\|\| target 3':UGUACGCUGGUC-CUGUAAC-CUUUCUCUUGAACUGUAGUCGGUACGAUUAAGCCCGUCAGU-ACAGGAGU 5'	-31.30	1	RIC-seq
chrX:139865812:139865849:[+]	chr11:6631172:6631221:[+]	nonBSJ supported	CDS	circRNA 5': GAAAGA-AAUCC-AGGUCUUCCA-GU---------CAGUCAGUGUCUUCC 3' \|\|\|\|\|\| \|\|: \| :\|\| \|\|\| \|: \|\|\|\|\|\| \|\|\|\|:\|\| target 3':CCUUUCUCUUGAACUGUAGUCGGUACGAUUAAGCCCGUCAGU-ACAGGAGU 5'	-26.70	2	RIC-seq
chrX:139865820:139865849:[+]	chr11:6631172:6631201:[+]	nonBSJ supported	CDS	circRNA 5':UCCAGGUC--UUCCAGUCAGUCAGUGUCUUCC 3' \|\|\| \|: \|\|\| \| \|\|\|\|\|\| \|\|\|\|:\|\| target 3':CGGUACGAUUAAGCCC-GUCAGU-ACAGGAGU 5'	-21.70	1	RIC-seq