Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866407:139866450:[+] chr11:123504091:123504132:[-] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUACGUCUUCCAA 3'


            |||||| || ||||: |: || |||||


target  3':UGAAGGUAAGA-GAACGUCAUUACCUCUUACU-UGGUCAAGGUC 5'

 -19.60 1 RIC-seq
chrX:139866407:139866458:[+] chr11:123504091:123504138:[-] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUA 3'


            |||||| || ||||: |: || ||||| :||


target  3':UGAAGGUAAGA-GAACGUCAUUACCUCUUACU-UGGUCAAGGUCGG--UCAA 5'

 -20.00 22 RIC-seq