Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866269:139866281:[+] chr15:49422939:49422951:[-] nonBSJ supported CDS

circRNA 5':AGACUAUCCAUGU 3'


            || :|||||||


target  3':CCUAGUAGGUACU 5'

 -11.20 2 RIC-seq
chrX:139866340:139866353:[+] chr15:49422937:49422951:[-] nonBSJ supported CDS

circRNA 5':CAGGAA-AUCCGUGU 3'


            |||| ||||:||


target  3':UUCCUAGUAGGUACU 5'

 -13.60 1 RIC-seq
chrX:139866340:139866362:[+] chr15:49422937:49422958:[-] nonBSJ supported CDS

circRNA 5':CAGGAA-AUCCGUGUCUUCCAGCA 3'


            |||| ||||:|| ||


target  3':UUCCUAGUAGGUACUACAA--CGA 5'

 -14.50 18 RIC-seq