Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866086:139866108:[+] chr15:38644038:38644061:[+] nonBSJ supported 3UTR

circRNA 5':CCAAAAAA-GCCAUGUCUUCCAGA 3'


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target  3':UGUUUUGUACGGUACGUGAGUUCC 5'

 -16.40 1 RIC-seq
chrX:139866262:139866271:[+] chr15:38646170:38646179:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUC-CAGA 3'


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target  3': AGAAUCGUCG 5'

 -3.50 2 RIC-seq