Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866295:139866308:[+] chr9:135768703:135768718:[-] nonBSJ supported 3UTR

circRNA 5': CUUG-UCUUCCCUCA 3'


            |||| :||||| |


target  3':GGAACUGGAAGGAUGG 5'

 -12.80 16 RIC-seq
chrX:139866347:139866362:[+] chr9:135768702:135768718:[-] nonBSJ supported 3UTR

circRNA 5':UCCGUG-UCUUCCAGCA 3'


            || || :||||| :|


target  3':UGGAACUGGAAGGAUGG 5'

 -11.40 2 RIC-seq