Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866683:139866711:[+] chr11:82868262:82868289:[+] nonBSJ supported 5UTR

circRNA 5':AGCAUCUCUGUGU-CUUCCAGCAUCUUCAU 3'


            | |||||:|| : |||||||| |: ||


target  3':AC-UAGAGGCAGGUGAAGGUCGGCGGUGU 5'

 -27.20 1 RIC-seq
chrX:139865339:139865360:[+] chr11:82895882:82895904:[+] nonBSJ supported CDS

circRNA 5':GGGUUUCCGAUGGCAC--CUGUGU 3'


            |:|||| || || ||:||


target  3':AUUAAAGUCUCCCACAACGAUAC 5'

 -10.30 23 RIC-seq
chrX:139865339:139865361:[+] chr11:82895888:82895904:[+] nonBSJ supported CDS

circRNA 5':GGGUUUCCGAUGGCACCUGUGUC 3'


            |:|||| || || ||||


target  3':AUUAAAGUCU-CC-----CACAA 5'

 -8.80 4 RIC-seq