Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865636:139865672:[+] chr10:81144788:81144829:[-] nonBSJ supported 3UTR

circRNA 5':GGUCUUCCAUCAAAUAC-AGA-----UCUUCCAGCUAAUC-CAU 3'


            ||| ||||| ||| ||| ||| || ||


target  3':ACAG-AGGUAAAAUCUUUUCUCCCCAAGACAC-CGAACAGAGUC 5'

 -12.10 1 RIC-seq
chrX:139865671:139865686:[+] chr10:81144788:81144806:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCC----AGAAAAA 3'


            |||||:| ||||||


target  3': ACAGAGGUAAAAUCUUUUC 5'

 -9.90 2 RIC-seq
chrX:139865671:139865715:[+] chr10:81144788:81144828:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCC----AGAAAAA------UCUGUGUCUUCCACCAAAUCCAAGUCUUC 3'


            |||||:| |||||| |||||| ||| ||||:


target  3': ACAGAGGUAAAAUCUUUUCUCCCCAAGACACCGAA-------------CAGAGU 5'

 -18.40 37 RIC-seq