Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865480:139865518:[+] chr14:81651912:81651952:[-] nonBSJ supported CDS

circRNA 5':CGGACAAUCCAUGU-CUUCCAAGAAGCUC-CAA-GUCUUC-CA 3'


            ||| ||| ||| ||||| :||| || :||||| |


target  3':UUCUCA-AGG-ACAGGAAGGAGUAGUGAGUGUAGUAGAAGUGA 5'

 -26.10 10 RIC-seq
chrX:139865486:139865518:[+] chr14:81651917:81651952:[-] nonBSJ supported CDS

circRNA 5':AUCCAUGU-CUUCCAAGAAGCUC-CAA-GUCUUC-CA 3'


            ||| ||| ||||| :||| || :||||| |


target  3':AAGG-ACAGGAAGGAGUAGUGAGUGUAGUAGAAGUGA 5'

 -25.80 1 RIC-seq
chrX:139865492:139865518:[+] chr14:81651927:81651951:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAAGAAGCUC-CAA-GUCUUC-CA 3'


            ||:|| :||| || :||||| |


target  3': AGGAGUAG---UGAGUGUAGUAGAAGUG 5'

 -15.60 1 RIC-seq
chrX:139865492:139865518:[+] chr14:81651927:81651952:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAAGAAGCUC-CAA-GUCUUC-CA 3'


            ||:|| :||| || :||||| |


target  3': AGGAGUAG---UGAGUGUAGUAGAAGUGA 5'

 -15.40 11 RIC-seq