5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865771:139865814:[+] | chr10:45958657:45958699:[-] | nonBSJ supported | CDS |
circRNA 5':CAGAAAGA-AAUCCAGGUCUUCCAGUCAA--UCAGUGUCUUCCAGAA 3' |||| || |||||||||| | ||| || ||| |||| target 3':CUCUUCCUGUUAGGUCCAGC--GACAGGAAAAGGCACCUC--GUCUC 5' |
-27.60 | 29 | RIC-seq |
| chrX:139865772:139865814:[+] | chr10:45958657:45958699:[-] | nonBSJ supported | CDS |
circRNA 5': AGAAAGA-AAUCCAGGUCUUCCAGUCAA--UCAGUGUCUUCCAGAA 3' |||| || |||||||||| | ||| || ||| |||| target 3':CUCUUCCUGUUAGGUCCAGC--GACAGGAAAAGGCACCUC--GUCUC 5' |
-27.10 | 3 | RIC-seq |
| chrX:139865798:139865822:[+] | chr10:45958646:45958671:[-] | nonBSJ supported | CDS |
circRNA 5':AUCAGUGUCUUCCAGAAAGA-AAUCC 3' |||| | |||| || ||||| target 3':AAGUCUCUUCCC-UCUUCCUGUUAGGU 5' |
-11.00 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr10:45958657:45958699:[-] | target | - | chr10:45958676-45958677 | G>A | LAML-KR | ICGC |