Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866639:139866663:[+] chr5:125877927:125877949:[-] nonBSJ supported 3UTR

circRNA 5':GGGC-UUCCAGCAUCUGCUCGUCUUC 3'


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target  3':GUCGAAAGGU--UAGACGUU-GGAAA 5'

 -17.70 1 RIC-seq
chrX:139866639:139866669:[+] chr5:125877927:125877968:[-] nonBSJ supported 3UTR

circRNA 5':GGGC-UUCCAGCAUCUGCUCGUCUUC-------------CAACAU 3'


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target  3':GUCGAAAGGU--UAGACGUU-GGAAACAAUCUUACUUCCGUUGUU 5'

 -18.50 15 RIC-seq