Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865939:139865979:[+]	chr5:172518255:172518286:[+]	nonBSJ supported	CDS	circRNA 5':UUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCCA 3' \|\|\|\| \| \|\|\| \|\|:\|\|:\|\|\| :\|\|\|:\|\|\| target 3':CAGGAGUAGUAGUUGUAGGAGGA---------GCAGGAGGA 5'	-31.10	1	RIC-seq
chrX:139865986:139866016:[+]	chr5:172518255:172518291:[+]	nonBSJ supported	CDS	circRNA 5':CCAU-GUCUUC-----CAGUAACCUCCCAGUCUUCCA 3' \|\|\| \|\|\|:\|\| \|\|::\| \|\|\|\|\| \|\|\|:\|\|\| target 3':AGUACCAGGAGUAGUAGUUGUAGGAGGAGCAGGAGGA 5'	-31.20	13	RIC-seq
chrX:139866346:139866377:[+]	chr5:172518255:172518286:[+]	nonBSJ supported	CDS	circRNA 5':AUCCGUGUCUUCCAGCAAA-UCCACGUCUUCCA 3' \|\|\| ::\|\| \| \|\|:\|\| \|\|\| \|\|\|\|:\|\|\| target 3':CAGGAGUAGUA-GUUGUAGGAGGAGCAGGAGGA 5'	-29.30	1	RIC-seq
chrX:139866348:139866377:[+]	chr5:172518255:172518291:[+]	nonBSJ supported	CDS	circRNA 5':CCGU-GUCUUC-----CAGCAAA-UCCACGUCUUCCA 3' \|:\| \|\|\|:\|\| \|\|:\|\| \|\|\| \|\|\|\|:\|\|\| target 3':AGUACCAGGAGUAGUAGUUGUAGGAGGAGCAGGAGGA 5'	-30.30	13	RIC-seq