Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865424:139865448:[+] chr5:132159704:132159729:[-] nonBSJ supported CDS

circRNA 5':UCCAGAUAAUCCUGAGCU---UCCA-GAA 3'


            |||| ||||||:|: ||| ||


target  3':CGGUCG---AGGACUUGGUCGAGGAGCUC 5'

 -20.20 20 RIC-seq
chrX:139865432:139865448:[+] chr5:132159709:132159729:[-] nonBSJ supported CDS

circRNA 5':AUCCUGAGCU---UCCA-GAA 3'


            ||||||:|: ||| ||


target  3':GAGGACUUGGUCGAGGAGCUC 5'

 -17.00 1 RIC-seq