Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866525:139866588:[+]	chr5:132094083:132094127:[-]	nonBSJ supported	Intron	circRNA 5':AAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAGAAAAUAUAUGUCUUCCAACUAAGCUACGUC 3' \|\| \|\|\|\|\| \|\|\|\|\| \|\|\|\|\|: \|\|: \|\| :\|:\|\|\|\| target 3':GUC-GUACAUAUGGUCU----GGUGCGUCG------------ACGU--GGAUCCCGUGGUGCAC 5'	-30.40	1	RIC-seq
chrX:139866525:139866594:[+]	chr5:132094083:132094135:[-]	nonBSJ supported	Intron	circRNA 5':AAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAGAAAAUAUAUGUCUUCCAACUAAGCUACGUC--UU-CCAA 3' \|\| \|\|\|\|\| \|\|\|\|\| \|\|\|\|\|: \|\|: \|\| :\|:\|\|\|\| \|\| \|\|\| target 3':GUC-GUACAUAUGGUCU----GGUGCGUCG------------ACGU--GGAUCCCGUGGUGCACUCAACGGU 5'	-31.80	15	RIC-seq
chrX:139866525:139866594:[+]	chr5:132094083:132094136:[-]	nonBSJ supported	Intron	circRNA 5':AAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAGAAAAUAUAUGUCUUCCAACUAAGCUACGUC--UU-CCAA 3' \|\| \|\|\|\|\| \|\|\|\|\| \|\|\|\|\|: \|\|: \|\| :\|:\|\|\|\| \|\| \|\|\| target 3':GUC-GUACAUAUGGUCU----GGUGCGUCG------------ACGU--GGAUCCCGUGGUGCACUCAACGGUA 5'	-31.80	15	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866525:139866594:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC