Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865613:139865646:[+] chr4:128751918:128751956:[+] nonBSJ supported CDS

circRNA 5':UCCA-UGUCUUCCA-AUAAUUUCAAGGUCUU---CCAUC 3'


            || || ||| |: ||||| ||| |||:


target  3':UGGAAACUGAAACGAUGAUAAAGACUUUGAAAAUGGUGU 5'

 -7.50 16 RIC-seq
chrX:139865653:139865673:[+] chr4:128751918:128751951:[+] nonBSJ supported CDS

circRNA 5':AGAUCUUCCAGCUAAU----------------CCAUG 3'


            || ||| |||| |||:


target  3':ACU-GAAA--CGAUGAUAAAGACUUUGAAAAUGGUGU 5'

 -6.50 15 RIC-seq